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Resumé

I obtained my phD from the Universitat de Barcelona in late 1988. I worked at the Department of Statistics in the School of Biology, where Dr. Jordi Ocaña was my advisor. We worked in the development of mathematical and computer models in Population Genetics and Evolutionary Ecology.

After finishing my phD thesis, I went to the Molecular Biology Computer Research Resource at the Dana Farber Cancer Institute--- Harvard University ( Division of Biostatistics). I was a postdoctoral fellow with Dr. Temple F. Smith. In late 1991, I moved to the BioMolecular Engineering Research Center at Boston University, when Temple F. Smith was named director. During these years, I was involved in several projects in the field of sequence analysis: gene identification, automatic knowledge extraction from biosequence databases, protein sequence pattern analysis, and molecular evolution.

On Spring 1992, I moved to Los Alamos National Laboratory , where I was a postdoctoral fellow at the Theoretical Biology and Biophysics Group with Dr. James W. Fickett. At Los Alamos I worked essentially on genome analysis related problems: estimation of genome's protein coding density, and characterization of large scale genome structure.

Since 1994 I am a researcher at the Institut Municipal d'Investigació Mèdica, within the Grup de Recerca en Informàtica Biomèdica (GRIB). Since year 1999, I am also associated professor with the Universitat Pompeu Fabra. During the period 1994-1999 I was associated with the Department of Statistics of the Universitat de Barcelona.

Since year 2005 I am coordinating the Bioinformatics and Genomics program of the Centre de Regualció Genòmica in Barcelona.

Publications

2015

Sadd BM, Barribeau SM, Bloch G, de Graaf DC, Dearden P, Elsik CG, Gadau J, Grimmelikhuijzen CJP, Hasselmann M, Lozier JD et al..  2015.  The genomes of two key bumblebee species with primitive eusocial organization.. Genome biology. 16:76. Abstract
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Delmore KE, Hübner S, Kane NC, Schuster R, Andrew RL, Câmara F, Guigó R, Irwin DE.  2015.  Genomic analysis of a migratory divide reveals candidate genes for migration and implicates selective sweeps in generating islands of differentiation. Molecular ecology. 24:1873–1888. Abstract
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Pervouchine DD, Djebali S, Breschi A, Davis CA, Barja PP, Dobin A, Tanzer A, Lagarde J, Zaleski C, See L-H et al..  2015.  Enhanced transcriptome maps from multiple mouse tissues reveal evolutionary constraint in gene expression. Nature communications. 6:5903. Abstract
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2013

Nikolaou C, Bermúdez I, Manichanh C, García-Martinez J, Guigó R, Pérez-Ortín JE, Roca J.  2013.  Topoisomerase II regulates yeast genes with singular chromatin architectures. Nucleic Acids Res.. Abstract
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Cases M, Furlong LI, Albanell J, Altman RB, Bellazzi R, Boyer S, Brand A, Brookes AJ, Brunak S, Clark TW et al..  2013.  Improving data and knowledge management to better integrate health care and research. J. Intern. Med..
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Ferreira PG, Patalano S, Chauhan R, Ffrench-Constant R, Gabaldón T, Guigó R, Sumner S.  2013.  Transcriptome analyses of primitively eusocial wasps reveal novel insights into the evolution of sociality and the origin of alternative phenotypes.. Genome Biol.. 14:R20. Abstract
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Bava FA, Eliscovich C, Ferreira PG, Miñana B, Ben-Dov C, Guigó R, Valcárcel J, Méndez R.  2013.  CPEB1 coordinates alternative 3'-UTR formation with translational regulation. Nature. 495:121–125. Abstract
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Knowles D, Röder M, Merkel A, Guigó R.  2013.  Grape RNA-Seq analysis pipeline environment. Bioinformatics. 10.1093/bioinformatics/btt016 Abstract
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2012

Pervouchine DD, Knowles DG, Guigó R.  2012.  Intron-Centric Estimation of Alternative Splicing from RNA-seq data. Bioinformatics. 29(2):273-274. Abstract
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Griebel T, Zacher B, Ribeca P, Raineri E, Lacroix V, Guigó R, Sammeth M.  2012.  Modelling and simulating generic RNA-Seq experiments with the flux simulator. Nucleic Acids Res.. 40:10073–10083. Abstract
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List of publications in PubMed

Roderic Guigó

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Last seen: 7 years 30 weeks ago
Joined: 2009-08-24

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